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Cofit
Protein
Homologs
Top cofit genes for GFF1871 from
Variovorax sp. SCN45
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1)
KEGG:
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4727
Two-component transcriptional response regulator, LuxR family
no
0.61
2
GFF4677
Small-conductance mechanosensitive channel
no
0.60
3
GFF4347
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
no
0.60
4
GFF1671
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
no
0.60
5
GFF600
Metal-dependent phosphohydrolase, HD subdomain
no
0.55
6
GFF466
hypothetical protein
no
0.55
7
GFF6604
FIG00457034: hypothetical protein
no
0.53
8
GFF216
Transmembrane regulator protein PrtR
no
0.52
9
GFF1138
Transcriptional regulator, AcrR family
no
0.51
10
GFF6479
hypothetical protein
no
0.50
11
GFF1657
Nitronate monooxygenase (EC 1.13.12.16)
no
0.49
12
GFF6009
Acyl-CoA dehydrogenase STM0857
no
0.49
13
GFF571
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)
no
0.49
14
GFF3477
Phosphoprotein phosphatase
no
0.48
15
GFF5470
ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.48
16
GFF2598
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
no
0.47
17
GFF6245
no description
no
0.47
18
GFF190
Ankyrin
no
0.47
19
GFF1583
Fumarate hydratase class I, beta region (EC 4.2.1.2); L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32)
no
0.47
20
GFF423
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
no
0.47
Or look for
negative cofitness