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  • Top cofit genes for GFF1870 from Variovorax sp. SCN45

    Coenzyme A transferase
    SEED: Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3792 no description no 0.67
    2 GFF1833 (S)-mandelate dehydrogenase (EC 1.1.99.31) 0.25 0.59
    3 GFF4786 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.55
    4 GFF1760 Probable transmembrane protein no 0.53
    5 GFF5150 Taurine ABC transporter, permease protein TauC no 0.53
    6 GFF4009 D-amino acid dehydrogenase (EC 1.4.99.6) no 0.53
    7 GFF6189 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.34 0.52
    8 GFF7372 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) no 0.52
    9 GFF6117 Glycine/D-amino acid oxidases (deaminating) no 0.52
    10 GFF6102 hypothetical protein no 0.52
    11 GFF522 RND efflux system, inner membrane transporter no 0.51
    12 GFF4390 Membrane-fusion protein no 0.51
    13 GFF2682 Protein containing domains DUF403 no 0.50
    14 GFF5409 FIG00576366: hypothetical protein no 0.50
    15 GFF4377 putative plasmid stabilization protein no 0.50
    16 GFF3962 Opine dehydrogenase (EC 1.5.1.28) no 0.50
    17 GFF6319 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.49
    18 GFF3668 hypothetical protein no 0.48
    19 GFF6992 Flagellum-specific ATP synthase FliI no 0.48
    20 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.48

    Or look for negative cofitness