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  • Top cofit genes for GFF1868 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
    KEGG: polar amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6603 Glycosidases no 0.56
    2 GFF878 COGs COG2343 no 0.55
    3 GFF1923 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.55
    4 GFF7029 hypothetical protein no 0.50
    5 GFF3979 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) no 0.49
    6 GFF422 no description no 0.49
    7 GFF1459 Glutathione S-transferase (EC 2.5.1.18) no 0.48
    8 GFF4707 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.48
    9 GFF6430 L-carnitine dehydratase/bile acid-inducible protein F no 0.48
    10 GFF6306 Uncharacterized MFS-type transporter no 0.47
    11 GFF685 Tricarboxylate transport protein TctC no 0.47
    12 GFF6045 FIG00932121: hypothetical protein no 0.46
    13 GFF4333 Transcriptional regulator, LysR family no 0.46
    14 GFF1555 Transcriptional regulator, LysR family no 0.46
    15 GFF7256 Dehydratase, IlvD/Edd family no 0.46
    16 GFF6517 Cation transport protein ChaC no 0.46
    17 GFF1513 Cytochrome c551/c552 no 0.46
    18 GFF6705 hypothetical protein no 0.46
    19 GFF580 Rhodanese domain protein UPF0176, Betaproteobacterial subgroup no 0.45
    20 GFF5614 hypothetical protein no 0.45

    Or look for negative cofitness