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  • Top cofit genes for GFF1864 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Probable transcriptional regulator lrhA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1436 CaiB/BaiF family protein no 0.59
    2 GFF107 General secretion pathway protein K no 0.55
    3 GFF2646 Acetyl-CoA acetyltransferase no 0.55
    4 GFF3565 Acyl-CoA dehydrogenase no 0.54
    5 GFF6438 hypothetical protein no 0.54
    6 GFF5272 Various polyols ABC transporter, substrate-binding protein no 0.54
    7 GFF1837 Transcriptional regulator, LysR family no 0.53
    8 GFF1635 Polyketide synthase modules and related proteins no 0.52
    9 GFF129 Ankyrin no 0.52
    10 GFF862 hypothetical protein no 0.51
    11 GFF2275 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.51
    12 GFF1745 Acyl-CoA dehydrogenase no 0.51
    13 GFF3787 Biotin carboxylase (EC 6.3.4.14) no 0.50
    14 GFF7046 FIG00854755: hypothetical protein no 0.49
    15 GFF4730 hypothetical protein no 0.49
    16 GFF3181 FIG005069: Hypothetical protein no 0.49
    17 GFF3093 FIG138056: a glutathione-dependent thiol reductase 0.21 0.49
    18 GFF5266 Transaldolase (EC 2.2.1.2) no 0.49
    19 GFF2643 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.48
    20 GFF6579 Conjugative transfer protein TrbB no 0.47

    Or look for negative cofitness