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  • Top cofit genes for GFF1863 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Permeases of the major facilitator superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7411 no description no 0.57
    2 GFF5340 Efflux ABC transporter, ATP-binding protein 0.26 0.57
    3 GFF1302 DoxX family protein no 0.55
    4 GFF7391 hypothetical protein no 0.55
    5 GFF2685 DNA internalization-related competence protein ComEC/Rec2 no 0.54
    6 GFF5669 hypothetical protein no 0.54
    7 GFF6647 Two-component transcriptional response regulator, LuxR family no 0.52
    8 GFF2099 Acyl-CoA dehydrogenase no 0.51
    9 GFF2318 Transcriptional regulator ArgP, LysR family no 0.51
    10 GFF5367 GTP cyclohydrolase 1 type 2 homolog YbgI no 0.50
    11 GFF5243 General secretion pathway protein H no 0.50
    12 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.49
    13 GFF6471 Transcriptional regulator, AraC family no 0.49
    14 GFF2342 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.49
    15 GFF1392 Monooxygenase, flavin-binding family no 0.48
    16 GFF4223 BUG/TctC family periplasmic protein no 0.48
    17 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.48
    18 GFF4487 putative secreted protein no 0.47
    19 GFF2091 Cobalt/zinc/cadmium resistance protein CzcD no 0.47
    20 GFF1499 BUG/TctC family periplasmic protein no 0.47

    Or look for negative cofitness