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  • Top cofit genes for GFF1862 from Sphingobium sp. HT1-2

    Transcriptional regulator, MarR family
    SEED: HTH-type transcriptional regulator PetP

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF588 Beta-carotene hydroxylase no 0.81
    2 GFF2892 hypothetical protein no 0.76
    3 GFF987 Phage shock protein A @ Suppressor of sigma54-dependent transcription, PspA-like no 0.71
    4 GFF799 hypothetical protein no 0.71
    5 GFF3097 Inner membrane component of TAM transport system no 0.69
    6 GFF4429 Integral membrane protein TerC no 0.68
    7 GFF2770 hypothetical protein no 0.67
    8 GFF379 Tim44-like domain protein no 0.67
    9 GFF4227 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) no 0.66
    10 GFF5249 hypothetical protein no 0.66
    11 GFF2593 hypothetical protein no 0.65
    12 GFF1186 Nitrate ABC transporter, substrate-binding protein no 0.65
    13 GFF4055 ATP-dependent Clp protease ATP-binding subunit ClpX no 0.65
    14 GFF3284 ABC transporter no 0.65
    15 GFF1282 Transcriptional regulator, LysR family no 0.64
    16 GFF143 PhbF no 0.64
    17 GFF4630 FIG138928: iron-regulated membrane protein no 0.64
    18 GFF2073 hypothetical protein no 0.64
    19 GFF3865 hypothetical protein no 0.63
    20 GFF3046 hypothetical protein no 0.63

    Or look for negative cofitness