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  • Top cofit genes for PS417_09450 from Pseudomonas simiae WCS417

    Fis family transcriptional regulator
    SEED: Alkanesulfonates-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22140 glucose/xylose ABC transporter, permease component 2 (from data) no 0.28
    2 PS417_22145 glucose/xylose ABC transporter, periplasmic substrate-binding component (from data) 0.27 0.26
    3 PS417_22130 glucose/xylose ABC transporter, ATPase component (from data) no 0.26
    4 PS417_22135 glucose/xylose ABC transporter, permease component 1 (from data) no 0.24
    5 PS417_26420 hypothetical protein no 0.23
    6 PS417_01635 nitrogen regulation protein NR(I) no 0.22
    7 PS417_06200 protein-PII uridylyltransferase no 0.22
    8 PS417_22680 chemotaxis protein CheY no 0.22
    9 PS417_26760 oxidase no 0.22
    10 PS417_02480 DNA mismatch repair protein no 0.21
    11 PS417_12810 diguanylate cyclase 0.14 0.20
    12 PS417_22535 ornithine acetyltransferase no 0.20
    13 PS417_22450 ATP-dependent DNA helicase RuvA no 0.20
    14 PS417_08000 beta-hydroxylase no 0.20
    15 PS417_06680 nuclease PIN no 0.20
    16 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase no 0.20
    17 PS417_03670 MerR family transcriptional regulator no 0.19
    18 PS417_27615 ammonia channel protein 0.19 0.19
    19 PS417_02435 flagellar motor protein MotA 0.63 0.19
    20 PS417_01955 peptidase 0.58 0.19

    Or look for negative cofitness