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  • Top cofit genes for PS417_09440 from Pseudomonas simiae WCS417

    MerR family transcriptional regulator
    SEED: Redox-sensitive transcriptional activator SoxR
    KEGG: MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00335 cytochrome B561 0.36 0.19
    2 PS417_25835 hypothetical protein no 0.18
    3 PS417_14325 AraC family transcriptional regulator no 0.18
    4 PS417_06880 RNA polymerase sigma factor 0.22 0.17
    5 PS417_25790 aminoglycoside phosphotransferase no 0.17
    6 PS417_16060 protein tolQ 0.17 0.17
    7 PS417_09745 peptide ABC transporter substrate-binding protein no 0.16
    8 PS417_27535 chemotaxis protein CheY 0.23 0.16
    9 PS417_00615 hypothetical protein no 0.16
    10 PS417_14915 host specificity protein 0.58 0.16
    11 PS417_03135 acyl dehydratase no 0.15
    12 PS417_05745 hypothetical protein no 0.15
    13 PS417_16990 acyl-CoA dehydrogenase no 0.15
    14 PS417_11230 hydroxyacid dehydrogenase 0.34 0.15
    15 PS417_00300 cytochrome B559 subunit alpha no 0.15
    16 PS417_09965 hypothetical protein no 0.15
    17 PS417_17405 AraC family transcriptional regulator no 0.15
    18 PS417_16715 DoxX family protein no 0.15
    19 PS417_09920 hypothetical protein no 0.15
    20 PS417_09065 short-chain dehydrogenase 0.44 0.15

    Or look for negative cofitness