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  • Top cofit genes for GFF1856 from Variovorax sp. SCN45

    FIG00636408: hypothetical protein
    SEED: FIG00636408: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6937 Membrane protein no 0.56
    2 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.51
    3 GFF3722 FIG00931152: hypothetical protein no 0.48
    4 GFF4346 no description no 0.47
    5 GFF4528 Permease of the drug/metabolite transporter (DMT) superfamily 0.17 0.45
    6 GFF4617 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.45
    7 GFF3023 C4-dicarboxylate transport protein no 0.44
    8 GFF3393 Benzoate ABC transporter, ATP-binding protein 2 no 0.44
    9 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.43
    10 GFF2749 hypothetical protein no 0.43
    11 GFF4411 Conjugative transfer protein TrbK 0.30 0.43
    12 GFF2483 Urease alpha subunit (EC 3.5.1.5) 0.39 0.43
    13 GFF5819 no description no 0.42
    14 GFF4014 Transcriptional regulator, ArsR family no 0.42
    15 GFF7164 hypothetical protein no 0.42
    16 GFF3445 Cupin 2, conserved barrel no 0.41
    17 GFF4019 Arsenical-resistance protein ACR3 no 0.41
    18 GFF7094 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) no 0.41
    19 GFF6244 Predicted deacylase no 0.41
    20 GFF4941 Gfa-like protein no 0.41

    Or look for negative cofitness