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  • Top cofit genes for GFF1854 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4231 no description no 0.52
    2 GFF4377 putative plasmid stabilization protein no 0.50
    3 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.48
    4 GFF2664 FIG002343: hypothetical protein no 0.46
    5 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) no 0.46
    6 GFF2037 Acetylpolyamine aminohydrolase no 0.45
    7 GFF6934 Universal stress protein family no 0.44
    8 GFF3757 hypothetical protein no 0.44
    9 GFF4222 Butyryl-CoA dehydrogenase (EC 1.3.99.2) no 0.44
    10 GFF5498 Uncharacterized protein SPO0681 no 0.43
    11 GFF3003 Cobalt-containing nitrile hydratase subunit alpha (EC 4.2.1.84) no 0.43
    12 GFF5705 Transcriptional regulator, AcrR family no 0.42
    13 GFF4017 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.42
    14 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 no 0.42
    15 GFF7301 Glycogen phosphorylase (EC 2.4.1.1) no 0.41
    16 GFF6417 BUG/TctC family periplasmic protein no 0.41
    17 GFF1130 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.41
    18 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake no 0.40
    19 GFF6072 Transcriptional regulator, LysR family no 0.40
    20 GFF3380 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) no 0.40

    Or look for negative cofitness