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  • Top cofit genes for GFF1853 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7160 hypothetical protein no 0.66
    2 GFF12 Two-component system sensor histidine kinase no 0.65
    3 GFF7282 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) no 0.65
    4 GFF7102 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) no 0.64
    5 GFF640 no description no 0.64
    6 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) no 0.62
    7 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) no 0.60
    8 GFF4608 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) no 0.59
    9 GFF199 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA no 0.59
    10 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.59
    11 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.58
    12 GFF1681 Methylisocitrate lyase (EC 4.1.3.30) no 0.57
    13 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) no 0.56
    14 GFF6814 NADH dehydrogenase (EC 1.6.99.3) no 0.56
    15 GFF3389 Glycosyl transferases, related to UDP-glucuronosyltransferase no 0.56
    16 GFF4828 no description no 0.55
    17 GFF5681 Predicted gluconate TRAP family transporter, DctM subunit no 0.55
    18 GFF1644 hypothetical protein no 0.55
    19 GFF1377 Phosphohydrolase (MutT/nudix family protein) 0.57 0.55
    20 GFF6373 T6SS component TssA (ImpA) no 0.54

    Or look for negative cofitness