• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_09415 from Pseudomonas simiae WCS417

    3-isopropylmalate dehydratase
    SEED: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16190 bile acid:sodium symporter no 0.21
    2 PS417_24580 pseudouridine synthase no 0.21
    3 PS417_07380 hypothetical protein no 0.21
    4 PS417_12380 peptidase S54 no 0.21
    5 PS417_00300 cytochrome B559 subunit alpha no 0.21
    6 PS417_14175 ArsC family transcriptional regulator no 0.21
    7 PS417_19025 aspartate aminotransferase no 0.20
    8 PS417_00335 cytochrome B561 no 0.20
    9 PS417_03310 carbonate dehydratase no 0.20
    10 PS417_14450 chemotaxis protein no 0.20
    11 PS417_02745 FMN-dependent NADH-azoreductase no 0.19
    12 PS417_04220 4-carboxymuconolactone decarboxylase no 0.19
    13 PS417_14325 AraC family transcriptional regulator no 0.19
    14 PS417_19510 N-acetylmuramoyl-L-alanine amidase no 0.19
    15 PS417_26175 sarcosine oxidase subunit gamma no 0.19
    16 PS417_12145 acetoacetyl-CoA synthetase no 0.18
    17 PS417_02375 hypothetical protein 0.34 0.17
    18 PS417_24755 phosphoesterase no 0.17
    19 PS417_08415 hypothetical protein 0.47 0.17
    20 PS417_13455 alkaline proteinase inhibitor 0.73 0.17

    Or look for negative cofitness