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Cofit
Protein
Homologs
Top cofit genes for GFF1839 from
Variovorax sp. SCN45
Integral membrane protein
SEED: FIG00761799: membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3827
UPF0118 membrane protein SMc00793
no
0.68
2
GFF4902
hypothetical protein
no
0.58
3
GFF7003
Flagellar basal-body rod protein FlgF
no
0.56
4
GFF5247
hypothetical protein
no
0.53
5
GFF7160
hypothetical protein
no
0.53
6
GFF5271
Transcriptional regulator, LysR family
no
0.53
7
GFF3317
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
no
0.52
8
GFF7083
Mobile element protein
no
0.52
9
GFF6309
Secreted and surface protein containing fasciclin-like repeats
no
0.51
10
GFF6674
Predicted membrane protein
no
0.50
11
GFF682
2-hydroxychromene-2-carboxylate isomerase family protein
no
0.50
12
GFF6203
UDP-glucose 4-epimerase (EC 5.1.3.2)
no
0.49
13
GFF2535
Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)
no
0.49
14
GFF3725
RND efflux system, inner membrane transporter
no
0.48
15
GFF6137
TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6
no
0.48
16
GFF455
Uncharacterized UPF0721 integral membrane protein
no
0.48
17
GFF5353
Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
no
0.48
18
GFF6740
hypothetical protein
no
0.47
19
GFF7348
Oxidoreductase, aldo/keto reductase family
no
0.47
20
GFF552
Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8)
no
0.47
Or look for
negative cofitness