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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF1838 from
Sphingobium sp. HT1-2
Aldo/keto reductase, SMc04056 family
SEED: Oxidoreductase
KEGG:
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3727
Flagellar hook-basal body complex protein FliE
no
0.74
2
GFF4834
Transcriptional regulator, AcrR family
0.64
0.73
3
GFF3987
hypothetical protein
no
0.73
4
GFF4841
hypothetical protein
no
0.73
5
GFF1549
Efflux transport system, outer membrane factor (OMF) lipoprotein
no
0.72
6
GFF3871
Protein of unknown function DUF1428
0.31
0.72
7
GFF4901
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.70
8
GFF5089
hypothetical protein
no
0.69
9
GFF1507
Glycine-rich cell wall structural protein precursor
no
0.69
10
GFF1914
NADH-ubiquinone oxidoreductase-related protein
no
0.69
11
GFF3624
Nitrilotriacetate monooxygenase component A (EC 1.14.13.-)
no
0.69
12
GFF9
hypothetical protein
no
0.68
13
GFF1799
Glutathione S-transferase family protein
no
0.68
14
GFF3268
hypothetical protein
no
0.67
15
GFF4067
COG0441: Threonyl-tRNA synthetase
no
0.67
16
GFF3078
Fatty acid desaturase
no
0.67
17
GFF4753
Resolvase, N-terminal domain
no
0.65
18
GFF4323
hypothetical protein
no
0.65
19
GFF4807
hypothetical protein
no
0.65
20
GFF2763
hypothetical protein
no
0.65
Or look for
negative cofitness