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  • Top cofit genes for GFF1837 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Chromosome initiation inhibitor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2261 Adenylate cyclase (EC 4.6.1.1) no 0.65
    2 GFF2680 Protein of unknown function DUF1058 no 0.61
    3 GFF7327 FIG074102: hypothetical protein no 0.61
    4 GFF5984 L-lactate dehydrogenase no 0.59
    5 GFF7250 Putative transposase InsK for insertion sequence element IS150 no 0.59
    6 GFF6579 Conjugative transfer protein TrbB no 0.58
    7 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.57
    8 GFF107 General secretion pathway protein K no 0.57
    9 GFF5739 Flagellar biosynthesis protein FliQ no 0.57
    10 GFF1237 Methionine sulfoxide reductase cytochrome b subunit no 0.56
    11 GFF1390 ortholog of Bordetella pertussis (BX470248) BP2750 no 0.56
    12 GFF2001 Putative phosphatase YieH no 0.56
    13 GFF1775 no description no 0.55
    14 GFF4985 Tricarboxylate transport protein TctC no 0.55
    15 GFF7391 hypothetical protein no 0.54
    16 GFF4945 probable GntR-family transcriptional regulator no 0.54
    17 GFF1864 Transcriptional regulator, LysR family no 0.53
    18 GFF1012 Cystathionine beta-lyase (EC 4.4.1.8) no 0.53
    19 GFF4101 N-methylhydantoinase B (EC 3.5.2.14) no 0.53
    20 GFF3030 Uncharacterized protein ImpA no 0.52

    Or look for negative cofitness