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  • Top cofit genes for PS417_09320 from Pseudomonas simiae WCS417

    diguanylate phosphodiesterase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein no 0.22
    2 PS417_09615 glycosyl transferase family 1 0.84 0.22
    3 PS417_12955 sulfonate ABC transporter substrate-binding protein no 0.22
    4 PS417_02720 TetR family transcriptional regulator 0.85 0.21
    5 PS417_04300 FagA protein no 0.20
    6 PS417_22405 7-carboxy-7-deazaguanine synthase no 0.20
    7 PS417_09625 sugar ABC transporter substrate-binding protein no 0.19
    8 PS417_16710 hydrolase no 0.19
    9 PS417_09620 lipopolysaccharide biosynthesis protein 0.25 0.18
    10 PS417_14400 hypothetical protein no 0.18
    11 PS417_08395 ABC transporter permease 0.33 0.18
    12 PS417_00385 Fur family transcriptional regulator no 0.18
    13 PS417_15210 protein activator of alkane oxidation PraB no 0.18
    14 PS417_14545 amino acid transporter no 0.17
    15 PS417_01165 transcription accessory protein 0.54 0.17
    16 PS417_11590 ATPase no 0.17
    17 PS417_01505 gamma-aminobutyrate transporter no 0.17
    18 PS417_12280 MerR family transcriptional regulator 0.42 0.17
    19 PS417_13600 hypothetical protein no 0.17
    20 PS417_02855 histidinol phosphatase no 0.17

    Or look for negative cofitness