Top cofit genes for GFF1830 from Hydrogenophaga sp. GW460-11-11-14-LB1

Homoprotocatechuate degradative operon repressor
SEED: Homoprotocatechuate degradative operon repressor

Rank Hit Name Description Conserved? Cofitness  
1 GFF645 twitching motility protein PilJ 0.31 0.56
2 GFF1344 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein no 0.54
3 GFF3880 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.53
4 GFF4664 Type IV pilus biogenesis protein PilZ no 0.50
5 GFF1345 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) 0.38 0.50
6 GFF4769 FIG070318: hypothetical protein no 0.49
7 GFF3064 Probable cell division ftsn transmembrane protein no 0.48
8 GFF4888 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) no 0.48
9 GFF3560 tRNA-dihydrouridine synthase C (EC 1.-.-.-) no 0.47
10 GFF3834 Probable transmembrane protein no 0.46
11 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.46
12 GFF1778 ATP-dependent DNA helicase Rep no 0.46
13 GFF2570 Thymidine phosphorylase (EC 2.4.2.4) no 0.46
14 GFF3879 5-nucleotidase SurE (EC 3.1.3.5) 0.36 0.46
15 GFF2721 Twitching motility protein PilT no 0.46
16 GFF1438 Flagellar transcriptional activator FlhC no 0.45
17 GFF2864 Creatinine amidohydrolase (EC 3.5.2.10) no 0.45
18 GFF2572 Uncharacterized protein with LysM domain, COG1652 no 0.45
19 GFF5124 Sigma-54 dependent transcriptional regulator no 0.45
20 GFF2313 Transcriptional regulator, IclR family no 0.44

Or look for negative cofitness