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Cofit
Protein
Homologs
Top cofit genes for GFF183 from
Variovorax sp. SCN45
Virulence protein
SEED: Virulence protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5487
Thymidine phosphorylase (EC 2.4.2.4)
no
0.89
2
GFF5410
Adenylate cyclase (EC 4.6.1.1)
no
0.88
3
GFF5868
hypothetical protein
no
0.83
4
GFF5870
hypothetical protein
no
0.81
5
GFF5064
Exonuclease SbcC
no
0.80
6
GFF5869
internalin, putative
no
0.80
7
GFF5871
hypothetical protein
no
0.78
8
GFF6037
Transcriptional regulator, Crp/Fnr family
no
0.78
9
GFF3945
Phosphate transport regulator (distant homolog of PhoU)
no
0.76
10
GFF3923
Kynurenine formamidase, bacterial (EC 3.5.1.9)
no
0.74
11
GFF5150
Taurine ABC transporter, permease protein TauC
no
0.70
12
GFF184
Adenylate cyclase (EC 4.6.1.1)
no
0.69
13
GFF452
Chloride channel protein
no
0.69
14
GFF5261
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
no
0.69
15
GFF3307
FIG01161751: hypothetical protein
no
0.68
16
GFF5409
FIG00576366: hypothetical protein
no
0.67
17
GFF5325
3-dehydroquinate synthase (EC 4.2.3.4)
no
0.67
18
GFF255
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)
no
0.67
19
GFF2682
Protein containing domains DUF403
no
0.66
20
GFF5057
Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4)
no
0.66
Or look for
negative cofitness