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Cofit
Protein
Homologs
Top cofit genes for GFF1828 from
Variovorax sp. SCN45
phosphodiesterase I
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3937
Transcriptional regulator, AraC family
no
0.60
2
GFF493
RND efflux system, inner membrane transporter
no
0.59
3
GFF1117
FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)
no
0.56
4
GFF293
no description
no
0.56
5
GFF6392
hypothetical protein
no
0.55
6
GFF3911
Putative phosphoesterase
no
0.54
7
GFF3932
Acetyltransferase, GNAT family
no
0.53
8
GFF1217
Transcriptional regulator RpiR in protein degradation cluster
no
0.51
9
GFF6408
Urocanate hydratase (EC 4.2.1.49)
no
0.51
10
GFF1880
Previously called glutamate synthase [NADPH] small chain
no
0.50
11
GFF3258
hypothetical protein
no
0.50
12
GFF752
hypothetical protein
no
0.50
13
GFF2528
ABC transporter, ATP-binding protein PA3838
no
0.49
14
GFF5648
ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates)
no
0.49
15
GFF4401
no description
no
0.49
16
GFF2416
Transcriptional regulator YbhD, LysR family
no
0.48
17
GFF1419
Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)
no
0.48
18
GFF5855
T1SS secreted agglutinin RTX
no
0.48
19
GFF4272
BUG/TctC family periplasmic protein
no
0.48
20
GFF5408
Protein serine/threonine phosphatase PrpC, regulation of stationary phase
0.75
0.47
Or look for
negative cofitness