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  • Top cofit genes for PS417_09280 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05945 gamma-aminobutyraldehyde dehydrogenase no 0.32
    2 PS417_19785 flagellar biogenesis protein no 0.29
    3 PS417_21555 flagellar hook protein FlgE no 0.27
    4 PS417_21560 flagellar basal body rod modification protein FlgD no 0.26
    5 PS417_19860 flagellar hook protein FlgL no 0.26
    6 PS417_19885 flagellar basal body rod protein FlgG no 0.26
    7 PS417_21595 flagellar biosynthesis protein FlgN no 0.26
    8 PS417_21565 flagellar basal body rod protein FlgC no 0.26
    9 PS417_07195 hypothetical protein 0.40 0.26
    10 PS417_19840 flagellar cap protein FliD no 0.25
    11 PS417_19665 flagellar motor protein MotD no 0.25
    12 PS417_19865 flagellar hook protein FlgK no 0.25
    13 PS417_21575 chemotaxis protein no 0.25
    14 PS417_19825 ATPase AAA no 0.24
    15 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA no 0.24
    16 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.24
    17 PS417_19795 flagellar assembly protein FliH no 0.24
    18 PS417_18570 peptidoglycan-binding protein no 0.24
    19 PS417_18000 hypothetical protein no 0.24
    20 PS417_19765 flagellar hook-length control protein no 0.24

    Or look for negative cofitness