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  • Top cofit genes for GFF1825 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Type I secretion system ATPase, LssB family LapB
    SEED: Type I secretion system ATPase, LssB family LapB
    KEGG: putative ATP-binding cassette transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4479 PTS system, mannose-specific IIC component (EC 2.7.1.69) no 0.67
    2 GFF768 Arginine ABC transporter, periplasmic arginine-binding protein ArtJ 0.36 0.64
    3 GFF3551 Putative transport system permease protein no 0.63
    4 GFF4070 Probable secreted protein no 0.63
    5 GFF1455 NrfC protein 0.32 0.62
    6 GFF2741 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family no 0.61
    7 GFF878 FIG01045393: hypothetical protein no 0.61
    8 GFF1283 Phage capsid and scaffold no 0.60
    9 GFF905 Soluble cytochrome b562 no 0.60
    10 GFF3208 Acetate kinase (EC 2.7.2.1) 0.65 0.60
    11 GFF4522 Regulator of nucleoside diphosphate kinase 0.42 0.60
    12 GFF3726 YheO-like PAS domain no 0.60
    13 GFF4050 Protein ImpG/VasA 0.16 0.59
    14 GFF4255 putative Cytochrome bd2, subunit II 0.62 0.59
    15 GFF4771 Serine/threonine specific protein phosphatase 2 (EC 3.1.3.16) 0.36 0.58
    16 GFF4532 Sensor kinase CitA, DpiB (EC 2.7.3.-) no 0.58
    17 GFF617 Putative transport protein 0.36 0.58
    18 GFF1105 Hypothetical fimbrial chaperone ycbF precursor no 0.57
    19 GFF3010 UPF0149 exported protein YgfB no 0.57
    20 GFF1236 Actin-ADP-ribosyltransferase, toxin SpvB no 0.57

    Or look for negative cofitness