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  • Top cofit genes for PS417_09220 from Pseudomonas simiae WCS417

    cupin
    SEED: Mannose-6-phosphate isomerase (EC 5.3.1.8)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15710 nitrate reductase 0.33 0.21
    2 PS417_26345 choline dehydrogenase no 0.21
    3 PS417_28250 cell wall assembly protein no 0.21
    4 PS417_17285 hypothetical protein no 0.20
    5 PS417_18125 polar amino acid ABC transporter permease no 0.20
    6 PS417_15705 nitrate reductase no 0.20
    7 PS417_20910 membrane protein no 0.20
    8 PS417_07990 endoribonuclease L-PSP 0.27 0.19
    9 PS417_23315 transcriptional regulator no 0.19
    10 PS417_16935 diguanylate phosphodiesterase 0.34 0.19
    11 PS417_23215 RNA methyltransferase no 0.19
    12 PS417_01970 pilus assembly protein no 0.19
    13 PS417_08020 LysR family transcriptional regulator 0.30 0.19
    14 PS417_11705 cyclic peptide transporter no 0.19
    15 PS417_09035 hypothetical protein no 0.19
    16 PS417_03140 3-ketoacyl-ACP reductase no 0.19
    17 PS417_04935 hypothetical protein no 0.18
    18 PS417_20530 3-oxoadipate enol-lactonase no 0.18
    19 PS417_10570 cysteine protease no 0.18
    20 PS417_26535 cytochrome B561 no 0.18

    Or look for negative cofitness