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  • Top cofit genes for PS417_09210 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16525 isocitrate dehydrogenase 0.68 0.33
    2 PS417_14005 4-hydroxyphenylpyruvate dioxygenase no 0.32
    3 PS417_06060 phosphoenolpyruvate carboxylase 0.75 0.32
    4 PS417_01710 histidine utilization repressor no 0.31
    5 PS417_08580 histidine kinase 0.18 0.31
    6 PS417_04875 molybdenum cofactor biosynthesis protein MoaE no 0.30
    7 PS417_24710 lipoprotein no 0.30
    8 PS417_25960 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) 0.55 0.29
    9 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) 0.77 0.28
    10 PS417_04390 toluene tolerance protein 0.49 0.28
    11 PS417_22780 XRE family transcriptional regulator no 0.28
    12 PS417_17565 branched-chain amino acid aminotransferase 0.26 0.27
    13 PS417_04270 ribonuclease G no 0.27
    14 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase no 0.27
    15 PS417_08170 capsular biosynthesis protein no 0.26
    16 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.27 0.26
    17 PS417_22775 histidine kinase 0.52 0.26
    18 PS417_20100 hypothetical protein no 0.26
    19 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase no 0.26
    20 PS417_25650 anhydro-N-acetylmuramic acid kinase no 0.26

    Or look for negative cofitness