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  • Top cofit genes for PS417_09205 from Pseudomonas simiae WCS417

    membrane protein
    SEED: ABC-type multidrug transport system, permease component
    KEGG: antibiotic transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09200 ABC transporter 0.99 0.46
    2 PS417_04295 peptidase PmbA 0.48 0.38
    3 PS417_23830 hypothetical protein 0.21 0.35
    4 PS417_20920 D-alanyl-D-alanine carboxypeptidase no 0.35
    5 PS417_22125 porin 0.23 0.33
    6 PS417_21125 phosphoadenosine phosphosulfate reductase no 0.33
    7 PS417_04285 protease TldD 0.57 0.32
    8 PS417_12205 hypothetical protein 0.38 0.31
    9 PS417_02950 tRNA-dihydrouridine synthase B 0.70 0.30
    10 PS417_01340 agmatine deiminase no 0.30
    11 PS417_22780 XRE family transcriptional regulator 0.45 0.30
    12 PS417_26760 oxidase 0.55 0.29
    13 PS417_14835 amidase 0.16 0.28
    14 PS417_02975 3-dehydroquinate dehydratase 0.56 0.28
    15 PS417_26715 peptidase P60 0.36 0.28
    16 PS417_21830 TetR family transcriptional regulator 0.77 0.27
    17 PS417_16005 ATPase no 0.27
    18 PS417_24335 50S rRNA methyltransferase no 0.27
    19 PS417_05220 tRNA methyltransferase no 0.27
    20 PS417_26235 (Fe-S)-binding protein 0.46 0.27

    Or look for negative cofitness