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  • Top cofit genes for GFF1802 from Variovorax sp. SCN45

    Lignostilbene-alpha,beta-dioxygenase and related enzymes
    SEED: Lignostilbene-alpha,beta-dioxygenase and related enzymes

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2471 Outer membrane porin protein 32 precursor no 0.54
    2 GFF664 no description no 0.54
    3 GFF314 Acyltransferase no 0.53
    4 GFF2111 Permease of the drug/metabolite transporter (DMT) superfamily no 0.52
    5 GFF1237 Methionine sulfoxide reductase cytochrome b subunit no 0.52
    6 GFF4903 no description no 0.50
    7 GFF2240 hypothetical protein no 0.50
    8 GFF6215 no description no 0.50
    9 GFF930 Transcriptional regulator, GntR family no 0.49
    10 GFF4670 Transcriptional regulator, AcrR family no 0.48
    11 GFF6225 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) no 0.48
    12 GFF1837 Transcriptional regulator, LysR family no 0.48
    13 GFF1891 Transcriptional regulator, GntR family no 0.47
    14 GFF38 no description no 0.47
    15 GFF2256 Uncharacterized protein YcgL no 0.47
    16 GFF7084 Mobile element protein no 0.47
    17 GFF6107 Zinc transporter, ZIP family no 0.46
    18 GFF1484 Transcriptional regulator, LysR family no 0.46
    19 GFF4733 Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) no 0.46
    20 GFF4326 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) no 0.45

    Or look for negative cofitness