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  • Top cofit genes for GFF1794 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4129 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.48
    2 GFF4844 Conjugative transfer protein TrbL no 0.48
    3 GFF3414 Fumarylacetoacetase (EC 3.7.1.2) no 0.47
    4 GFF3277 Membrane protein insertion efficiency factor YidD no 0.46
    5 GFF1271 no description no 0.45
    6 GFF5260 Uncharacterized protein ygiD no 0.45
    7 GFF3947 Putative transmembrane protein no 0.45
    8 GFF1516 TRAP-type C4-dicarboxylate transport system, large permease component no 0.43
    9 GFF319 EXTRACYTOPLASMIC FUNCTION ALTERNATIVE SIGMA FACTOR no 0.43
    10 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) no 0.43
    11 GFF6892 Uncharacterized glutathione S-transferase-like protein 0.61 0.43
    12 GFF178 Mannonate dehydratase (EC 4.2.1.8) no 0.43
    13 GFF5720 Flagellar basal-body rod protein FlgG no 0.42
    14 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) no 0.42
    15 GFF151 FIG00460174: hypothetical protein no 0.42
    16 GFF3649 C-type cytochrome biogenesis protein ResA (thioredoxin) no 0.41
    17 GFF4488 Metal-binding GTPase YjiA no 0.41
    18 GFF6427 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) no 0.41
    19 GFF220 tRNA pseudouridine(55) synthase (EC 5.4.99.25) no 0.41
    20 GFF1401 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.41

    Or look for negative cofitness