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  • Top cofit genes for PS417_00900 from Pseudomonas simiae WCS417

    4-aminobutyrate aminotransferase
    SEED: 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
    KEGG: 5-aminovalerate aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12665 hypothetical protein no 0.32
    2 PS417_23730 LysR family transcriptional regulator no 0.31
    3 PS417_27690 XRE family transcriptional regulator 0.74 0.28
    4 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) no 0.27
    5 PS417_17560 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) no 0.27
    6 PS417_21065 3-methylitaconate isomerase 0.32 0.26
    7 PS417_27005 membrane protein no 0.25
    8 PS417_13840 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) no 0.24
    9 PS417_01180 ribosomal protein S6 modification protein no 0.24
    10 PS417_05075 serine dehydratase 0.31 0.23
    11 PS417_03790 pilus assembly protein PilW 0.79 0.23
    12 PS417_25705 lipoate--protein ligase no 0.23
    13 PS417_20580 isocitrate dehydrogenase 0.43 0.22
    14 PS417_04975 response regulator receiver protein no 0.22
    15 PS417_00895 succinate-semialdehyde dehydrogenase 0.89 0.22
    16 PS417_17565 branched-chain amino acid aminotransferase 0.32 0.21
    17 PS417_17545 2-oxoisovalerate dehydrogenase 0.35 0.20
    18 PS417_10695 decarboxylase no 0.20
    19 PS417_27480 ABC transporter ATP-binding protein 0.60 0.19
    20 PS417_10535 hypothetical protein no 0.19

    Or look for negative cofitness