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  • Top cofit genes for GFF179 from Variovorax sp. SCN45

    D-mannonate oxidoreductase (EC 1.1.1.57)
    SEED: D-mannonate oxidoreductase (EC 1.1.1.57)
    KEGG: fructuronate reductase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF329 Nucleoside ABC transporter, ATP-binding protein no 0.55
    2 GFF3747 putative esterase no 0.51
    3 GFF4941 Gfa-like protein no 0.48
    4 GFF6276 Uncharacterized MFS-type transporter no 0.48
    5 GFF5287 FIG00455092: hypothetical protein no 0.48
    6 GFF5009 hypothetical protein no 0.48
    7 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) no 0.48
    8 GFF5975 Two-component transcriptional response regulator, LuxR family no 0.48
    9 GFF5622 Transcriptional regulator, AsnC family no 0.47
    10 GFF5254 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.47
    11 GFF1172 hypothetical protein no 0.46
    12 GFF42 hypothetical protein no 0.46
    13 GFF4788 Uncharacterized protein COG3236 no 0.46
    14 GFF6449 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) no 0.45
    15 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.44
    16 GFF6373 T6SS component TssA (ImpA) 0.20 0.44
    17 GFF3392 Transcriptional regulator, AraC family no 0.44
    18 GFF2770 BUG/TctC family periplasmic protein no 0.44
    19 GFF5130 hypothetical protein no 0.43
    20 GFF5082 Uncharacterized MFS-type transporter no 0.43

    Or look for negative cofitness