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  • Top cofit genes for PS417_00895 from Pseudomonas simiae WCS417

    succinate-semialdehyde dehydrogenase
    KEGG: glutarate semialdehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27690 XRE family transcriptional regulator 0.56 0.31
    2 PS417_20580 isocitrate dehydrogenase 0.30 0.23
    3 PS417_00900 4-aminobutyrate aminotransferase 0.89 0.22
    4 PS417_21275 GntR family transcriptional regulator 0.32 0.21
    5 PS417_12665 hypothetical protein no 0.21
    6 PS417_16815 acyl-CoA dehydrogenase no 0.21
    7 PS417_23730 LysR family transcriptional regulator no 0.21
    8 PS417_04680 porin no 0.20
    9 PS417_16840 monovalent cation/H+ antiporter subunit D 0.30 0.20
    10 PS417_03160 metal ABC transporter ATPase 0.33 0.20
    11 PS417_16970 membrane protein 0.45 0.20
    12 PS417_01180 ribosomal protein S6 modification protein no 0.19
    13 PS417_12020 peptidase 0.68 0.19
    14 PS417_04450 hypothetical protein 0.52 0.18
    15 PS417_25705 lipoate--protein ligase no 0.18
    16 PS417_00560 NAD synthetase 0.44 0.18
    17 PS417_00760 ShlB family hemolysin secretion/activation protein no 0.17
    18 PS417_04890 ATP-dependent RNA helicase RhlB no 0.17
    19 PS417_28360 hypothetical protein 0.28 0.17
    20 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) no 0.17

    Or look for negative cofitness