Top cofit genes for GFF178 from Variovorax sp. SCN45

Mannonate dehydratase (EC 4.2.1.8)
SEED: Starvation sensing protein RspA
KEGG: starvation sensing protein RspA

Rank Hit Name Description Conserved? Cofitness  
1 GFF6195 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.70
2 GFF4129 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.67
3 GFF1774 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system no 0.66
4 GFF6657 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system no 0.66
5 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) no 0.66
6 GFF3414 Fumarylacetoacetase (EC 3.7.1.2) no 0.65
7 GFF3546 Chaperone protein HtpG 0.38 0.64
8 GFF2437 hypothetical protein no 0.63
9 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.62
10 GFF101 Phosphate-binding DING protein (related to PstS) no 0.62
11 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) 0.51 0.62
12 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) no 0.61
13 GFF6884 FIG00932717: hypothetical protein no 0.61
14 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) no 0.61
15 GFF6606 no description no 0.61
16 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.61
17 GFF5673 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.35 0.60
18 GFF5676 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) no 0.60
19 GFF4747 Quinone oxidoreductase (EC 1.6.5.5) no 0.60
20 GFF4825 SWIB/MDM2 domain-containing proteins no 0.60

Or look for negative cofitness