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  • Top cofit genes for PS417_09050 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: DNA-binding response regulator GltR, controls specific porins for the entry of glucose
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12610 RNA polymerase sigma factor 0.50 0.31
    2 PS417_03070 LuxR family transcriptional regulator 0.28 0.31
    3 PS417_18870 hypothetical protein no 0.31
    4 PS417_21045 cysteine synthase no 0.30
    5 PS417_27605 hypothetical protein no 0.30
    6 PS417_13425 cupin no 0.28
    7 PS417_06365 RNA polymerase sigma factor no 0.28
    8 PS417_22310 CAIB/BAIF family CoA transferase no 0.27
    9 PS417_23645 amino acid permease no 0.27
    10 PS417_21050 serine acetyltransferase no 0.26
    11 PS417_22230 class I peptide chain release factor no 0.26
    12 PS417_11170 aldehyde dehydrogenase no 0.26
    13 PS417_24030 MFS transporter no 0.25
    14 PS417_20955 secretion protein no 0.25
    15 PS417_10090 hypothetical protein no 0.24
    16 PS417_19775 chemotaxis protein CheY no 0.24
    17 PS417_05035 hypothetical protein no 0.24
    18 PS417_19140 TenA family transcriptional regulator no 0.24
    19 PS417_12825 MFS transporter no 0.24
    20 PS417_21040 sulfurylase no 0.24

    Or look for negative cofitness