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    • Top cofit genes for GFF1778 from Variovorax sp. SCN45

    Transcriptional regulator, HxlR family
    SEED: Transcriptional regulator, HxlR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3741 Uncharacterized MFS-type transporter no 0.52
    2 GFF761 FIG00537905: hypothetical protein no 0.51
    3 GFF6419 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) no 0.50
    4 GFF3428 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) no 0.49
    5 GFF6992 Flagellum-specific ATP synthase FliI no 0.47
    6 GFF2724 FIG01220323: hypothetical protein no 0.47
    7 GFF5104 2-dehydropantoate 2-reductase (EC 1.1.1.169) no 0.46
    8 GFF2584 Sulfate permease no 0.46
    9 GFF3438 Amidohydrolase family protein no 0.45
    10 GFF1728 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.44
    11 GFF3706 ABC transporter, permease protein 2 (cluster 11, riboflavin/purine nucleoside/unknown) no 0.44
    12 GFF4943 Chloride channel protein no 0.44
    13 GFF6019 Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2) no 0.44
    14 GFF2903 no description no 0.44
    15 GFF1818 FIG00932412: hypothetical protein no 0.43
    16 GFF4539 no description no 0.42
    17 GFF5192 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.42
    18 GFF6906 Transcriptional regulator, MarR family no 0.41
    19 GFF5651 hypothetical protein no 0.41
    20 GFF4310 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.41

    Or look for negative cofitness