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  • Top cofit genes for GFF1770 from Sphingobium sp. HT1-2

    Gene Transfer Agent tail tape measure
    SEED: Gene Transfer Agent tail tape measure

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF862 putative cytochrome c no 0.78
    2 GFF3969 hypothetical protein no 0.77
    3 GFF3794 hypothetical protein no 0.77
    4 GFF3214 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) no 0.76
    5 GFF4203 DNA polymerase IV (EC 2.7.7.7) no 0.76
    6 GFF1613 Pyridoxine 4-dehydrogenase PhxI (EC 1.1.1.65) no 0.75
    7 GFF4937 putative 3-oxoacyl-[acyl-carrier-protein] reductase no 0.74
    8 GFF2362 PQQ-dependent oxidoreductase, gdhB family no 0.72
    9 GFF635 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) no 0.72
    10 GFF1820 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB (EC 3.5.1.110) no 0.72
    11 GFF1782 Gene Transfer Agent associated protein Sala_2001 no 0.71
    12 GFF2843 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A no 0.70
    13 GFF3520 General secretion pathway protein C no 0.70
    14 GFF276 hypothetical protein no 0.69
    15 GFF3567 hypothetical protein no 0.69
    16 GFF725 hypothetical protein no 0.69
    17 GFF2259 '5'-nucleotidase SurE (EC 3.1.3.5)' transl_table=11 no 0.69
    18 GFF135 Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) no 0.69
    19 GFF2265 hypothetical protein no 0.68
    20 GFF3825 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) no 0.68

    Or look for negative cofitness