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  • Top cofit genes for PS417_00885 from Pseudomonas simiae WCS417

    integrase
    SEED: Integrase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06365 RNA polymerase sigma factor no 0.43
    2 PS417_13425 cupin no 0.39
    3 PS417_21045 cysteine synthase no 0.38
    4 PS417_16370 chemotaxis protein CheY no 0.38
    5 PS417_23645 amino acid permease no 0.38
    6 PS417_28265 pyridoxamine kinase no 0.37
    7 PS417_21050 serine acetyltransferase no 0.37
    8 PS417_21040 sulfurylase no 0.37
    9 PS417_12610 RNA polymerase sigma factor no 0.37
    10 PS417_20955 secretion protein no 0.36
    11 PS417_16160 ABC transporter substrate-binding protein 0.41 0.36
    12 PS417_27605 hypothetical protein no 0.36
    13 PS417_10720 chemotaxis protein CheY no 0.35
    14 PS417_09900 hypothetical protein no 0.35
    15 PS417_15835 universal stress protein no 0.34
    16 PS417_03070 LuxR family transcriptional regulator no 0.33
    17 PS417_17515 GfdT protein no 0.33
    18 PS417_12550 chemotaxis protein no 0.33
    19 PS417_06970 LysR family transcriptional regulator no 0.33
    20 PS417_16070 TonB-dependent receptor 0.30 0.32

    Or look for negative cofitness