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  • Top cofit genes for GFF176 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
    SEED: cystine ABC tranporter, permease protein, putative
    KEGG: glutamine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF402 hypothetical protein no 0.61
    2 GFF6078 no description no 0.52
    3 GFF7025 hypothetical protein no 0.50
    4 GFF4990 Acyl-CoA hydrolase (EC 3.1.2.20) no 0.50
    5 GFF2802 DUF1176 domain-containing protein no 0.48
    6 GFF85 Transcriptional regulator, LysR family no 0.48
    7 GFF542 no description no 0.47
    8 GFF2132 Thiol:disulfide interchange protein DsbC no 0.46
    9 GFF4196 no description no 0.46
    10 GFF4177 Epoxyqueuosine reductase (EC 1.17.99.6) QueH no 0.45
    11 GFF5182 no description no 0.44
    12 GFF2492 BUG/TctC family periplasmic protein no 0.44
    13 GFF1780 hypothetical protein no 0.43
    14 GFF3084 no description no 0.43
    15 GFF2778 Fosmidomycin resistance protein no 0.43
    16 GFF6289 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC no 0.42
    17 GFF3085 no description no 0.42
    18 GFF1129 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC no 0.42
    19 GFF7413 no description no 0.42
    20 GFF6831 hypothetical protein no 0.41

    Or look for negative cofitness