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  • Top cofit genes for GFF1755 from Variovorax sp. SCN45

    diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2554 Integral membrane protein no 0.65
    2 GFF4980 Transcriptional regulator, AsnC family no 0.62
    3 GFF3525 Protein tyrosine/serine phosphatase no 0.61
    4 GFF3518 no description no 0.59
    5 GFF2373 Transcriptional regulator, LysR family no 0.59
    6 GFF7217 hypothetical protein no 0.59
    7 GFF2367 Transcriptional regulator, LysR family no 0.56
    8 GFF3956 no description no 0.56
    9 GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.55
    10 GFF1385 Multidrug resistance transporter, Bcr/CflA family no 0.54
    11 GFF1135 hypothetical protein no 0.54
    12 GFF3378 hypothetical protein no 0.54
    13 GFF7221 Protein lysine acetyltransferase Pat (EC 2.3.1.-) no 0.53
    14 GFF4280 oxidoreductase FAD/NAD(P)-binding domain protein no 0.53
    15 GFF4251 no description no 0.53
    16 GFF7043 Putative transmembrane protein no 0.53
    17 GFF4132 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.52
    18 GFF6592 hypothetical protein no 0.52
    19 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) no 0.52
    20 GFF314 Acyltransferase no 0.51

    Or look for negative cofitness