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  • Top cofit genes for GFF1753 from Variovorax sp. SCN45

    LysR family transcriptional regulator lrhA
    SEED: LysR family transcriptional regulator lrhA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3730 Integral membrane protein no 0.55
    2 GFF3399 Benzoate--CoA ligase (EC 6.2.1.25) 0.31 0.51
    3 GFF6304 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) no 0.51
    4 GFF4728 Two-component system sensor histidine kinase no 0.50
    5 GFF4218 no description no 0.49
    6 GFF6417 BUG/TctC family periplasmic protein no 0.49
    7 GFF4935 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.49
    8 GFF4896 Integrase no 0.48
    9 GFF1307 Homoserine dehydrogenase (EC 1.1.1.3) no 0.47
    10 GFF1462 L-carnitine dehydratase/bile acid-inducible protein F no 0.47
    11 GFF6982 hypothetical protein no 0.47
    12 GFF2486 Urease gamma subunit (EC 3.5.1.5) 0.38 0.46
    13 GFF4690 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA no 0.46
    14 GFF5496 BUG/TctC family periplasmic protein no 0.46
    15 GFF4937 no description no 0.45
    16 GFF4909 Two-component transcriptional response regulator, OmpR family no 0.45
    17 GFF285 no description no 0.45
    18 GFF2244 hypothetical protein no 0.45
    19 GFF6812 no description no 0.44
    20 GFF5781 Transcriptional regulator, LysR family no 0.44

    Or look for negative cofitness