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Cofit
Protein
Homologs
Top cofit genes for GFF1742 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1822
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
no
0.61
2
GFF3331
Glutathione S-transferase (EC 2.5.1.18)
no
0.57
3
GFF707
probable integral membrane protein NMA1898
no
0.53
4
GFF5107
Transcriptional regulator, LysR family
no
0.51
5
GFF6573
Conjugative transfer protein TrbF
no
0.50
6
GFF4313
2-dehydropantoate 2-reductase (EC 1.1.1.169)
no
0.50
7
GFF1090
Phosphohistidine phosphatase SixA
no
0.50
8
GFF1926
ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.50
9
GFF5472
SEED: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)
no
0.50
10
GFF526
Tricarboxylate transport transcriptional regulator TctD
no
0.49
11
GFF4506
hypothetical protein
no
0.48
12
GFF3489
Transcriptional regulator, AcrR family
no
0.48
13
GFF1625
Transcriptional regulator, LysR family
no
0.47
14
GFF2194
Tol-Pal system peptidoglycan-associated lipoprotein PAL
no
0.47
15
GFF10
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
no
0.47
16
GFF4483
ATP-dependent hsl protease ATP-binding subunit HslU
no
0.46
17
GFF4918
hypothetical protein
no
0.46
18
GFF6119
Glutamate carboxypeptidase (EC 3.4.17.11)
no
0.46
19
GFF4716
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.46
20
GFF1614
Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1)
no
0.46
Or look for
negative cofitness