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  • Top cofit genes for PS417_08855 from Pseudomonas simiae WCS417

    glycine/betaine ABC transporter substrate-binding protein
    SEED: Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein
    KEGG: glycine betaine/proline transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12610 RNA polymerase sigma factor no 0.31
    2 PS417_12530 LysR family transcriptional regulator 0.40 0.26
    3 PS417_13425 cupin no 0.25
    4 PS417_03070 LuxR family transcriptional regulator 0.58 0.25
    5 PS417_06365 RNA polymerase sigma factor 0.25 0.25
    6 PS417_19145 membrane protein no 0.25
    7 PS417_11170 aldehyde dehydrogenase no 0.25
    8 PS417_28265 pyridoxamine kinase no 0.25
    9 PS417_27505 transcriptional regulator no 0.24
    10 PS417_20425 hypothetical protein no 0.24
    11 PS417_12825 MFS transporter no 0.23
    12 PS417_16160 ABC transporter substrate-binding protein no 0.23
    13 PS417_16070 TonB-dependent receptor no 0.23
    14 PS417_21040 sulfurylase 0.27 0.23
    15 PS417_22230 class I peptide chain release factor 0.37 0.23
    16 PS417_05985 chemotaxis protein CheY no 0.23
    17 PS417_18945 endoribonuclease no 0.23
    18 PS417_24450 membrane protein no 0.23
    19 PS417_05975 chemotaxis protein CheW 0.17 0.22
    20 PS417_17515 GfdT protein no 0.22

    Or look for negative cofitness