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  • Top cofit genes for GFF1741 from Variovorax sp. SCN45

    UPF0324 inner membrane protein YeiH
    SEED: Putative membrane protein YeiH

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.72
    2 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.65 0.67
    3 GFF5917 T6SS component TssB (ImpB/VipA) 0.31 0.66
    4 GFF4178 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) no 0.66
    5 GFF5831 Ketosteroid isomerase-related protein no 0.64
    6 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.63
    7 GFF3335 no description no 0.63
    8 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.62
    9 GFF126 Repressor homolog no 0.61
    10 GFF753 Methyl-accepting chemotaxis sensor/transducer protein no 0.61
    11 GFF6704 no description no 0.61
    12 GFF5390 RecA protein 0.34 0.60
    13 GFF2663 FIG022979: MoxR-like ATPases no 0.60
    14 GFF6581 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.59
    15 GFF1792 Transcriptional regulator, IclR family no 0.58
    16 GFF2617 no description no 0.58
    17 GFF1675 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.57
    18 GFF2567 Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) 0.49 0.57
    19 GFF5203 hypothetical protein no 0.57
    20 GFF1575 BUG/TctC family periplasmic protein no 0.57

    Or look for negative cofitness