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  • Top cofit genes for GFF1728 from Variovorax sp. SCN45

    D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
    SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
    KEGG: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3717 Putative aminoacrylate peracid reductase RutC @ RidA/YER057c/UK114 superfamily protein 0.13 0.60
    2 GFF4310 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.58
    3 GFF5149 Taurine ABC transporter, ATP-binding protein TauB 0.31 0.57
    4 GFF1667 N-methylhydantoinase B (EC 3.5.2.14) no 0.56
    5 GFF5970 Uncharacterized MFS-type transporter no 0.54
    6 GFF3814 OpgC protein no 0.54
    7 GFF6517 Cation transport protein ChaC no 0.54
    8 GFF2752 FIG00974677: hypothetical protein no 0.53
    9 GFF5829 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53
    10 GFF7114 hypothetical protein no 0.52
    11 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) 0.34 0.52
    12 GFF765 hypothetical protein no 0.51
    13 GFF811 Glutathione S-transferase (EC 2.5.1.18) no 0.50
    14 GFF492 no description no 0.50
    15 GFF4687 no description no 0.49
    16 GFF5370 TPR domain protein, putative component of TonB system no 0.49
    17 GFF6274 Ketosteroid isomerase-related protein 0.69 0.49
    18 GFF6734 Transcriptional regulator, AraC family no 0.48
    19 GFF5614 hypothetical protein no 0.48
    20 GFF6673 Membrane protein no 0.48

    Or look for negative cofitness