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  • Top cofit genes for GFF1727 from Sphingobium sp. HT1-2

    Pectate lyase (EC 4.2.2.2)
    SEED: COG3866 Pectate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3798 Transcriptional regulator, AcrR family no 0.78
    2 GFF182 hypothetical protein no 0.76
    3 GFF883 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) no 0.76
    4 GFF677 hypothetical protein no 0.76
    5 GFF3370 hypothetical protein no 0.75
    6 GFF525 Benzoate transport protein no 0.74
    7 GFF4637 4-hydroxybutyrate coenzyme A transferase no 0.74
    8 GFF4995 similar to partitioning protein no 0.72
    9 GFF4492 Flagellar biosynthesis protein FliQ no 0.71
    10 GFF2735 Uncharacterized MFS-type transporter no 0.71
    11 GFF1126 succinoglycan biosynthesis ketolase no 0.70
    12 GFF2456 hypothetical protein no 0.70
    13 GFF2980 hypothetical protein no 0.70
    14 GFF4502 DnaJ-class molecular chaperone CbpA no 0.69
    15 GFF1169 hypothetical protein no 0.69
    16 GFF4079 Protein of unknown function DUF541 0.28 0.69
    17 GFF1723 hypothetical protein no 0.68
    18 GFF125 TonB-dependent receptor no 0.68
    19 GFF2725 alpha-L-arabinofuranosidase (EC 3.2.1.55) no 0.68
    20 GFF4631 hypothetical protein no 0.67

    Or look for negative cofitness