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Cofit
Protein
Homologs
Top cofit genes for GFF1727 from
Sphingobium sp. HT1-2
Pectate lyase (EC 4.2.2.2)
SEED: COG3866 Pectate lyase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3798
Transcriptional regulator, AcrR family
no
0.78
2
GFF182
hypothetical protein
no
0.76
3
GFF883
Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
no
0.76
4
GFF677
hypothetical protein
no
0.76
5
GFF3370
hypothetical protein
no
0.75
6
GFF525
Benzoate transport protein
no
0.74
7
GFF4637
4-hydroxybutyrate coenzyme A transferase
no
0.74
8
GFF4995
similar to partitioning protein
no
0.72
9
GFF4492
Flagellar biosynthesis protein FliQ
no
0.71
10
GFF2735
Uncharacterized MFS-type transporter
no
0.71
11
GFF1126
succinoglycan biosynthesis ketolase
no
0.70
12
GFF2456
hypothetical protein
no
0.70
13
GFF2980
hypothetical protein
no
0.70
14
GFF4502
DnaJ-class molecular chaperone CbpA
no
0.69
15
GFF1169
hypothetical protein
no
0.69
16
GFF4079
Protein of unknown function DUF541
0.28
0.69
17
GFF1723
hypothetical protein
no
0.68
18
GFF125
TonB-dependent receptor
no
0.68
19
GFF2725
alpha-L-arabinofuranosidase (EC 3.2.1.55)
no
0.68
20
GFF4631
hypothetical protein
no
0.67
Or look for
negative cofitness