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  • Top cofit genes for GFF1718 from Variovorax sp. SCN45

    Malate dehydrogenase (EC 1.1.1.37)
    SEED: Malate dehydrogenase (EC 1.1.1.37)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF361 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17) 0.30 0.57
    2 GFF5474 no description no 0.57
    3 GFF2855 Putative hydrolase or acyltransferase no 0.52
    4 GFF1209 hypothetical protein no 0.50
    5 GFF6166 Transcriptional regulator, AcrR family no 0.50
    6 GFF3143 hypothetical protein no 0.49
    7 GFF6971 no description no 0.48
    8 GFF2288 Glutathione-regulated potassium-efflux system protein KefC no 0.48
    9 GFF591 Renalase (EC 1.6.3.5), oxidases 1,2-dihydro- and 1,6-dihydro- beta-NAD(P)H isomers back to NAD(P) no 0.47
    10 GFF2859 Excinuclease ABC subunit C no 0.47
    11 GFF5012 Citronellol dehydrogenase; Citronellal dehydrogenase no 0.47
    12 GFF2501 O-antigen acetylase no 0.46
    13 GFF2471 Outer membrane porin protein 32 precursor no 0.46
    14 GFF2294 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy no 0.46
    15 GFF6554 Putative ATP/GTP-binding protein no 0.46
    16 GFF1051 no description no 0.46
    17 GFF7101 hypothetical protein no 0.45
    18 GFF5693 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.44
    19 GFF4251 no description no 0.44
    20 GFF2452 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC 1.3.1.1) no 0.44

    Or look for negative cofitness