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  • Top cofit genes for PS417_08730 from Pseudomonas simiae WCS417

    cytochrome C
    SEED: Cytochrome c heme lyase subunit CcmH
    KEGG: cytochrome c-type biogenesis protein CcmH

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17435 dehydrogenase no 0.27
    2 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.63 0.26
    3 PS417_17495 multidrug ABC transporter permease 0.23 0.26
    4 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC 0.56 0.25
    5 PS417_21750 acetyl-CoA synthetase 0.77 0.25
    6 PS417_06160 beta-(1-3)-glucosyl transferase no 0.24
    7 PS417_17450 amino acid ABC transporter substrate-binding protein 0.40 0.24
    8 PS417_06515 beta-agarase 0.41 0.24
    9 PS417_17425 hypothetical protein no 0.24
    10 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.59 0.24
    11 PS417_09725 transporter 0.54 0.22
    12 PS417_04595 cell division protein MraZ 0.66 0.22
    13 PS417_17455 cytochrome C 0.57 0.22
    14 PS417_17485 membrane protein 0.30 0.22
    15 PS417_17420 ethanol oxidation regulatory protein ercA (from data) no 0.22
    16 PS417_19965 histidine kinase 0.76 0.22
    17 PS417_13295 TetR family transcriptional regulator no 0.21
    18 PS417_06135 glycerol-3-phosphate acyltransferase no 0.21
    19 PS417_14940 LysR family transcriptional regulator no 0.21
    20 PS417_04180 GntR family transcriptional regulator 0.59 0.21

    Or look for negative cofitness