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  • Top cofit genes for GFF1701 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1711 DUF3701 domain / Site-specific tyrosine recombinase no 0.56
    2 GFF6684 ABC transporter, ATP-binding protein no 0.55
    3 GFF2823 Hemin transport protein HmuS no 0.54
    4 GFF3094 17 kDa surface antigen no 0.54
    5 GFF4812 no description no 0.54
    6 GFF3085 no description no 0.53
    7 GFF1518 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.53
    8 GFF1700 hypothetical protein no 0.53
    9 GFF1632 RNA polymerase ECF-type sigma factor no 0.51
    10 GFF5670 Protein SlyX no 0.50
    11 GFF38 no description no 0.49
    12 GFF4112 Rhodanese-related sulfurtransferase, 4 domains no 0.49
    13 GFF629 hypothetical protein no 0.49
    14 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.48
    15 GFF476 InterPro IPR005134 COGs COG2862 no 0.48
    16 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) no 0.48
    17 GFF438 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) no 0.48
    18 GFF789 protease Do no 0.47
    19 GFF4700 Various polyols ABC transporter, permease protein 1 no 0.47
    20 GFF1957 no description no 0.47

    Or look for negative cofitness