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  • Top cofit genes for GFF1701 from Sphingobium sp. HT1-2

    Cold shock protein of CSP family
    SEED: Cold shock protein CspA
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1079 Lactoylglutathione lyase (EC 4.4.1.5) 0.37 0.74
    2 GFF2297 hypothetical protein no 0.73
    3 GFF2944 hypothetical protein no 0.73
    4 GFF1050 Peptidase no 0.73
    5 GFF687 hypothetical protein 0.41 0.71
    6 GFF5298 Membrane-bound lytic murein transglycosylase B no 0.70
    7 GFF2074 hypothetical protein no 0.70
    8 GFF945 Protein containing domains DUF404, DUF407, DUF403 no 0.69
    9 GFF3723 Glucans biosynthesis glucosyltransferase H no 0.68
    10 GFF782 TldD protein, part of TldE/TldD proteolytic complex 0.25 0.68
    11 GFF935 hypothetical protein no 0.67
    12 GFF238 putative carboxylesterase no 0.67
    13 GFF1978 Flp pilus assembly protein RcpC/CpaB no 0.66
    14 GFF4309 hypothetical protein no 0.66
    15 GFF1535 TonB-dependent receptor no 0.66
    16 GFF1775 Gene Transfer Agent (GTA) ORFG08 no 0.66
    17 GFF5316 Catalase KatE-intracellular protease (EC 1.11.1.6) no 0.66
    18 GFF3333 Uncharacterized chaperone protein YegD no 0.64
    19 GFF2634 hypothetical protein no 0.63
    20 GFF3918 Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT no 0.63

    Or look for negative cofitness