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Cofit
Protein
Homologs
Top cofit genes for PS417_08650 from
Pseudomonas simiae WCS417
transcriptional regulator
SEED: Transcriptional regulators
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_25395
excinuclease ABC subunit A
0.60
0.29
2
PS417
_20800
recombination protein RecR
0.43
0.26
3
PS417
_10645
magnesium ABC transporter ATPase
no
0.24
4
PS417
_13500
ATP-dependent DNA helicase
0.50
0.24
5
PS417
_09625
sugar ABC transporter substrate-binding protein
no
0.23
6
PS417
_07530
multidrug transporter
0.27
0.22
7
PS417
_18685
excinuclease ABC subunit B
0.61
0.22
8
PS417
_24305
DNA repair protein RadA
0.47
0.22
9
PS417
_24070
recombination and repair protein
0.54
0.21
10
PS417
_09590
membrane protein
0.56
0.21
11
PS417
_15115
exonuclease SbcD
no
0.21
12
PS417
_01165
transcription accessory protein
0.59
0.20
13
PS417
_20535
peptidylprolyl isomerase
no
0.20
14
PS417
_15120
chromosome segregation protein SMC
no
0.20
15
PS417
_10725
excinuclease ABC subunit C
0.61
0.20
16
PS417
_06510
ATP-dependent DNA helicase DinG
0.54
0.20
17
PS417
_15095
hypothetical protein
0.13
0.19
18
PS417
_15975
glutamate carboxypeptidase
no
0.19
19
PS417
_24600
hydrogenase
0.48
0.19
20
PS417
_03995
Fe(II)-dependent oxygenase
no
0.18
Or look for
negative cofitness