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  • Top cofit genes for GFF1700 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2357 DNA repair protein RecN no 0.63
    2 GFF5984 L-lactate dehydrogenase no 0.60
    3 GFF1012 Cystathionine beta-lyase (EC 4.4.1.8) no 0.57
    4 GFF1403 MATE efflux family protein no 0.56
    5 GFF5673 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) no 0.55
    6 GFF539 no description no 0.55
    7 GFF6030 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.54
    8 GFF1701 BUG/TctC family periplasmic protein no 0.53
    9 GFF3309 Beta-hexosaminidase (EC 3.2.1.52) no 0.52
    10 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) no 0.52
    11 GFF6713 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.52
    12 GFF1090 Phosphohistidine phosphatase SixA no 0.51
    13 GFF3394 Benzoate ABC transporter, ATP-binding protein 1 no 0.50
    14 GFF3692 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.50
    15 GFF1801 Transcriptional regulator, LysR family no 0.50
    16 GFF878 COGs COG2343 no 0.50
    17 GFF3256 Peptidase, M20/M25/M40 family no 0.50
    18 GFF6575 Conjugative transfer protein TrbJ no 0.50
    19 GFF2229 Pca regulon regulatory protein PcaR no 0.50
    20 GFF1651 Transcriptional regulator, AcrR family no 0.50

    Or look for negative cofitness