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  • Top cofit genes for PS417_00085 from Pseudomonas simiae WCS417

    16S rRNA methyltransferase
    SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase B

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase 0.64 0.29
    2 PS417_01990 cell division protein 0.50 0.28
    3 PS417_18540 colicin V production CvpA 0.37 0.27
    4 PS417_21570 flagellar basal body rod protein FlgB 0.64 0.27
    5 PS417_21575 chemotaxis protein 0.42 0.26
    6 PS417_21595 flagellar biosynthesis protein FlgN 0.55 0.26
    7 PS417_19820 histidine kinase no 0.26
    8 PS417_22445 ATP-dependent DNA helicase RuvB 0.66 0.26
    9 PS417_20105 glycosyl transferase no 0.26
    10 PS417_19740 flagellar biosynthesis protein flip 0.71 0.26
    11 PS417_22565 formyltetrahydrofolate deformylase 0.38 0.25
    12 PS417_19665 flagellar motor protein MotD 0.44 0.25
    13 PS417_17240 trigger factor 0.91 0.25
    14 PS417_19830 flagellar assembly protein FliT 0.50 0.25
    15 PS417_19870 flagellar rod assembly protein FlgJ 0.55 0.25
    16 PS417_19660 cobalamin biosynthesis protein CobQ 0.44 0.25
    17 PS417_05635 membrane protein 0.45 0.25
    18 PS417_19690 histidine kinase no 0.25
    19 PS417_11175 AraC family transcriptional regulator no 0.25
    20 PS417_21565 flagellar basal body rod protein FlgC 0.68 0.25

    Or look for negative cofitness