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Cofit
Protein
Homologs
Top cofit genes for GFF1698 from
Variovorax sp. SCN45
BUG/TctC family periplasmic protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1312
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.65
2
GFF837
FIG01002808: hypothetical protein
no
0.64
3
GFF6802
Uncharacterized MFS-type transporter
no
0.59
4
GFF5542
no description
no
0.58
5
GFF3150
Transcriptional regulator, AsnC family
no
0.56
6
GFF3588
ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron)
no
0.55
7
GFF2341
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
no
0.53
8
GFF4484
ATP-dependent protease subunit HslV (EC 3.4.25.2)
no
0.53
9
GFF1962
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
no
0.53
10
GFF1556
Tricarboxylate transport protein TctC
no
0.53
11
GFF4167
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
no
0.52
12
GFF5479
hypothetical protein
no
0.52
13
GFF2415
Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
no
0.51
14
GFF830
ChlI component of cobalt chelatase involved in B12 biosynthesis
no
0.51
15
GFF3508
Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system
no
0.51
16
GFF5628
Transcriptional regulator Daci_1847, LysR family
no
0.50
17
GFF295
Ribonuclease G
no
0.50
18
GFF406
hypothetical protein
no
0.50
19
GFF6396
hypothetical protein
no
0.50
20
GFF3692
ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose)
no
0.50
Or look for
negative cofitness